Input_line_2:1:2: note: imported by module 'Cling_Runtime' in '/usr/local/Caskroom/miniforge/base/envs/pyroot/lib/Cling_Runtime.pcm' Input_line_2:1:2: note: imported by module 'Cling_Runtime_Extra' in '/usr/local/Caskroom/miniforge/base/envs/pyroot/lib/Cling_Runtime_Extra.pcm' Input_line_2:1:2: fatal error: module file '/usr/local/Caskroom/miniforge/base/envs/pyroot/lib/std.pcm' is out of date and needs to be rebuilt Input_line_1:1:2: note: imported by module 'std' in '/usr/local/Caskroom/miniforge/base/envs/pyroot/lib/std.pcm' ROOT: 6.26.0 (conda-forge/osx-64::root-6.26.0-p圓10h532db78_0)Įrror Message input_line_1:1:2: error: module 'Darwin' uses additional module map '/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/mach_debug.modulemap' used when.I am also getting the same error when trying to run a conda installation of ROOT on my Intel Mac: >: fatal error: module file '/Users/cburr/mambaforge/envs/pyroo/lib/Darwin.pcm' is out of date and needs to be rebuilt Replaced symbol at_quick_exit cannot be found in JIT! Replaced symbol atexit cannot be found in JIT! Input_line_2:1:2: note: imported by module 'Cling_Runtime' in '/Users/cburr/mambaforge/envs/pyroo/lib/Cling_Runtime.pcm' Input_line_2:1:2: note: imported by module 'Cling_Runtime_Extra' in '/Users/cburr/mambaforge/envs/pyroo/lib/Cling_Runtime_Extra.pcm' #include "cling/Interpreter/RuntimeUniverse.h" Input_line_2:1:2: fatal error: module file '/Users/cburr/mambaforge/envs/pyroo/lib/std.pcm' is out of date and needs to be rebuilt Possible C++ standard library mismatch, compiled with _LIBCPP_ABI_VERSION '1'Įxtraction of runtime standard library version was: '' Warning in cling::IncrementalParser::CheckABICompatibility():įailed to extract C++ standard library version. Input_line_1:1:2: note: imported by module 'std' in '/Users/cburr/mambaforge/envs/pyroo/lib/std.pcm' Input_line_1:1:2: error: module 'Darwin' uses additional module map '/Library/Developer/CommandLineTools/SDKs/MacOSX12.0.sdk/usr/include/darwin_posix_sys_types.modulemap' used when the module was built $ CONDA_BUILD_SYSROOT=/Library/Developer/CommandLineTools/SDKs/MacOSX12.0.sdk root > CONDA_BUILD_SYSROOT=/Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk/ root Pressing 'Enter' (or entering any other command) will terminate the script.Actually it seems related to the module maps wanting to be rebuilt thogh knowing what to do about that is a bit out of my depth. To run Molywood, provide the name of the input file, e.g. Now you can run molywood just typing molywood in your terminal. Run the Python Package Installer to install manually the last dependency: As VMD is an external software, macOS will ask you for permissions in order to install it.You must agree to the terms of the license: Note that although VMD software is free for academic use, it is mandatory to be registered for downloading it.Please go to the following URL and download the *.dmg file:
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